IL_7Q0P_228
3D structure
- PDB id
- 7Q0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with anisomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q0P_228 not in the Motif Atlas
- Geometric match to IL_5J7L_033
- Geometric discrepancy: 0.3212
- The information below is about IL_5J7L_033
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
7Q0P|1|A|C|1631
7Q0P|1|A|G|1632
7Q0P|1|A|C|1633
7Q0P|1|A|U|1634
*
7Q0P|1|A|A|1740
7Q0P|1|A|A|1741
7Q0P|1|A|A|1742
7Q0P|1|A|A|1743
7Q0P|1|A|G|1744
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain AO
- 60S ribosomal protein L41
- Chain Y
- Ribosomal 40S subunit protein S23B
Coloring options: