IL_7Q0R_066
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- CUAAG*CGAAAG
- Length
- 11 nucleotides
- Bulged bases
- 7Q0R|1|1|A|1584, 7Q0R|1|1|A|1585
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q0R_066 not in the Motif Atlas
- Homologous match to IL_8C3A_067
- Geometric discrepancy: 0.0589
- The information below is about IL_8C3A_067
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
7Q0R|1|1|C|1528
7Q0R|1|1|U|1529
7Q0R|1|1|A|1530
7Q0R|1|1|A|1531
7Q0R|1|1|G|1532
*
7Q0R|1|1|C|1581
7Q0R|1|1|G|1582
7Q0R|1|1|A|1583
7Q0R|1|1|A|1584
7Q0R|1|1|A|1585
7Q0R|1|1|G|1586
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AH
- Ribosomal 60S subunit protein L34B
- Chain AK
- Ribosomal protein L37
- Chain AM
- 60S ribosomal protein L39
- Chain j
- Ribosomal 60S subunit protein L2A
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