IL_7Q0R_077
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- UGGAAUU*GGAGAUG
- Length
- 14 nucleotides
- Bulged bases
- 7Q0R|1|1|U|1712, 7Q0R|1|1|A|1725
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q0R_077 not in the Motif Atlas
- Homologous match to IL_8C3A_079
- Geometric discrepancy: 0.0908
- The information below is about IL_8C3A_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60192.2
- Basepair signature
- cWW-tSH-tSH-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
7Q0R|1|1|U|1707
7Q0R|1|1|G|1708
7Q0R|1|1|G|1709
7Q0R|1|1|A|1710
7Q0R|1|1|A|1711
7Q0R|1|1|U|1712
7Q0R|1|1|U|1713
*
7Q0R|1|1|G|1723
7Q0R|1|1|G|1724
7Q0R|1|1|A|1725
7Q0R|1|1|G|1726
7Q0R|1|1|A|1727
7Q0R|1|1|U|1728
7Q0R|1|1|G|1729
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AA
- 60S ribosomal protein L27
- Chain AD
- Ribosomal 60S subunit protein L30
- Chain AH
- Ribosomal 60S subunit protein L34B
- Chain AQ
- Ribosomal 60S subunit protein L43A
- Chain O
- Ribosomal 40S subunit protein S13
- Chain z
- Ribosomal protein L19
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