IL_7Q4K_150

3D structure

PDB id

7Q4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUU*AAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q4K_150 not in the Motif Atlas

Geometric match to IL_255D_001

Geometric discrepancy: 0.3156

The information below is about IL_255D_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_13404.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

10

Unit IDs

7Q4K|1|BA|C|2103
7Q4K|1|BA|C|2104
7Q4K|1|BA|U|2105
7Q4K|1|BA|U|2106
*
7Q4K|1|BA|A|2183
7Q4K|1|BA|A|2184
7Q4K|1|BA|U|2185
7Q4K|1|BA|G|2186

Current chains

Chain BA

23S rRNA

Nearby chains