3D structure

PDB id
7Q7Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the methyltransferase-ribozyme 1 (with 1-benzylamine-adenosine)
Experimental method
X-RAY DIFFRACTION
Resolution
3.26 Å

Loop

Sequence
GACCC*GACAAC
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7Q7Z_002 not in the Motif Atlas
Geometric match to IL_7V9E_002
Geometric discrepancy: 0.1743
The information below is about IL_7V9E_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_25186.3
Basepair signature
cWW-L-R-L-R-L-R-cWW
Number of instances in this motif group
6

Unit IDs

7Q7Z|1|B|G|14
7Q7Z|1|B|A|15
7Q7Z|1|B|C|16
7Q7Z|1|B|C|17
7Q7Z|1|B|C|18
*
7Q7Z|1|C|G|30
7Q7Z|1|C|A|31
7Q7Z|1|C|C|32
7Q7Z|1|C|A|33
7Q7Z|1|C|A|34
7Q7Z|1|C|C|35

Current chains

Chain B
RNA 2
Chain C
RNA 3

Nearby chains

Chain A
RNA 1
Chain E
RNA 2
Chain F
RNA 3

Coloring options:


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