IL_7QCA_027

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GCAUGG*CGAAC

Length

11 nucleotides

Bulged bases

7QCA|1|L50|A|749

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|L50|G|747
7QCA|1|L50|C|748
7QCA|1|L50|A|749
7QCA|1|L50|U|750
7QCA|1|L50|G|751
7QCA|1|L50|G|752
*
7QCA|1|L50|C|776
7QCA|1|L50|G|777
7QCA|1|L50|A|778
7QCA|1|L50|A|779
7QCA|1|L50|C|780

Current chains

Chain L50

RNA 23S

Nearby chains

Chain L70

5S ribosomal RNA; 5S rRNA

Chain LD0

60S ribosomal protein L5

Chain LI0

S60 ribosomal protein L10

Chain LT0

60s ribosomal protein L21