IL_7QCA_034
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GACCGAAA*UGAAAAUUGAUGGCGC
- Length
- 24 nucleotides
- Bulged bases
- 7QCA|1|L50|A|995, 7QCA|1|L50|U|998, 7QCA|1|L50|U|999
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QCA|1|L50|G|891
7QCA|1|L50|A|892
7QCA|1|L50|C|893
7QCA|1|L50|C|894
7QCA|1|L50|G|895
7QCA|1|L50|A|896
7QCA|1|L50|A|897
7QCA|1|L50|A|898
*
7QCA|1|L50|U|992
7QCA|1|L50|G|993
7QCA|1|L50|A|994
7QCA|1|L50|A|995
7QCA|1|L50|A|996
7QCA|1|L50|A|997
7QCA|1|L50|U|998
7QCA|1|L50|U|999
7QCA|1|L50|G|1000
7QCA|1|L50|A|1001
7QCA|1|L50|U|1002
7QCA|1|L50|G|1003
7QCA|1|L50|G|1004
7QCA|1|L50|C|1005
7QCA|1|L50|G|1006
7QCA|1|L50|C|1007
Current chains
- Chain L50
- RNA 23S
Nearby chains
- Chain L70
- 5S ribosomal RNA; 5S rRNA
- Chain LB0
- 60S ribosomal protein L3
- Chain LFF
- 60S ribosomal protein L35a
- Chain LI0
- S60 ribosomal protein L10
- Chain LMM
- Ubiquitin
- Chain LO0
- Ribosomal protein L13A
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