IL_7QCA_085

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GAUUAGUAC*GGAAACC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|L50|G|2382
7QCA|1|L50|A|2383
7QCA|1|L50|U|2384
7QCA|1|L50|U|2385
7QCA|1|L50|A|2386
7QCA|1|L50|G|2387
7QCA|1|L50|U|2388
7QCA|1|L50|A|2389
7QCA|1|L50|C|2390
*
7QCA|1|L50|G|2395
7QCA|1|L50|G|2396
7QCA|1|L50|A|2397
7QCA|1|L50|A|2398
7QCA|1|L50|A|2399
7QCA|1|L50|C|2400
7QCA|1|L50|C|2401

Current chains

Chain L50

RNA 23S

Nearby chains

Chain LB0

60S ribosomal protein L3

Chain LH0

60S ribosomal protein L9

Chain LMM

Ubiquitin

Chain LV0

Ribosomal protein L23