IL_7QCA_098
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GAAAAACA*UUAAGCC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QCA_098 not in the Motif Atlas
- Geometric match to IL_9H3G_148
- Geometric discrepancy: 0.1927
- The information below is about IL_9H3G_148
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01750.1
- Basepair signature
- cWW-cWW-L-cSW-L-cSW-L-R-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7QCA|1|L70|G|20
7QCA|1|L70|A|21
7QCA|1|L70|A|22
7QCA|1|L70|A|23
7QCA|1|L70|A|24
7QCA|1|L70|A|25
7QCA|1|L70|C|26
7QCA|1|L70|A|27
*
7QCA|1|L70|U|52
7QCA|1|L70|U|53
7QCA|1|L70|A|54
7QCA|1|L70|A|55
7QCA|1|L70|G|56
7QCA|1|L70|C|57
7QCA|1|L70|C|58
Current chains
- Chain L70
- RNA 5S
Nearby chains
- Chain LD0
- 60S ribosomal protein L5
- Chain LJ0
- 60S ribosomal protein L11
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