IL_7QCA_107

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CGAAG*UGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|C|62
7QCA|1|S60|G|63
7QCA|1|S60|A|64
7QCA|1|S60|A|65
7QCA|1|S60|G|66
*
7QCA|1|S60|U|74
7QCA|1|S60|G|75
7QCA|1|S60|A|76
7QCA|1|S60|A|77
7QCA|1|S60|G|78

Current chains

Chain S60

RNA SSU

Nearby chains

Chain LW0

Ribosomal protein L24E

Chain SG0

40S ribosomal protein S6

Chain SY0

40s ribosomal protein s24