IL_7QCA_117

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GGG*UGAUUC

Length

9 nucleotides

Bulged bases

7QCA|1|S60|U|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|G|266
7QCA|1|S60|G|267
7QCA|1|S60|G|268
*
7QCA|1|S60|U|279
7QCA|1|S60|G|280
7QCA|1|S60|A|281
7QCA|1|S60|U|282
7QCA|1|S60|U|283
7QCA|1|S60|C|284

Current chains

Chain S60

RNA SSU

Nearby chains

Chain SE0

40S ribosomal protein S4

Chain SJ0

40S ribosomal protein S9

Chain SX0

uS12 SX0