IL_7QCA_124

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GUGCCAG*CGGUAAUAC

Length

16 nucleotides

Bulged bases

7QCA|1|S60|A|446, 7QCA|1|S60|U|448

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|G|429
7QCA|1|S60|U|430
7QCA|1|S60|G|431
7QCA|1|S60|C|432
7QCA|1|S60|C|433
7QCA|1|S60|A|434
7QCA|1|S60|G|435
*
7QCA|1|S60|C|442
7QCA|1|S60|G|443
7QCA|1|S60|G|444
7QCA|1|S60|U|445
7QCA|1|S60|A|446
7QCA|1|S60|A|447
7QCA|1|S60|U|448
7QCA|1|S60|A|449
7QCA|1|S60|C|450

Current chains

Chain S60

RNA SSU

Nearby chains

Chain SD0

40S ribosomal protein S3

Chain SEE

eS30 SEE

Chain SX0

uS12 SX0