IL_7QCA_126

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CGUAG*UCAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|C|494
7QCA|1|S60|G|495
7QCA|1|S60|U|496
7QCA|1|S60|A|497
7QCA|1|S60|G|498
*
7QCA|1|S60|U|670
7QCA|1|S60|C|671
7QCA|1|S60|A|672
7QCA|1|S60|A|673
7QCA|1|S60|G|674

Current chains

Chain S60

RNA SSU

Nearby chains

Chain L50

Large subunit ribosomal RNA; LSU rRNA

Chain SL0

40S ribosomal protein S11

Chain SN0

40S ribosomal protein S13

Chain SX0

uS12 SX0