IL_7QCA_131

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GAAGGAGG*CAAGAAC

Length

15 nucleotides

Bulged bases

7QCA|1|S60|A|578

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|G|573
7QCA|1|S60|A|574
7QCA|1|S60|A|575
7QCA|1|S60|G|576
7QCA|1|S60|G|577
7QCA|1|S60|A|578
7QCA|1|S60|G|579
7QCA|1|S60|G|580
*
7QCA|1|S60|C|652
7QCA|1|S60|A|653
7QCA|1|S60|A|654
7QCA|1|S60|G|655
7QCA|1|S60|A|656
7QCA|1|S60|A|657
7QCA|1|S60|C|658

Current chains

Chain S60

RNA SSU

Nearby chains

Chain LCC

60S ribosomal protein L3

Chain SAA

40S ribosomal protein S26

Chain SB0

eS1 SB0

Chain SBB

eS27 SBB

Chain SN0

40S ribosomal protein S13