IL_7QCA_133

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GCGAG*UGAUGACC

Length

13 nucleotides

Bulged bases

7QCA|1|S60|U|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|G|597
7QCA|1|S60|C|598
7QCA|1|S60|G|599
7QCA|1|S60|A|600
7QCA|1|S60|G|601
*
7QCA|1|S60|U|612
7QCA|1|S60|G|613
7QCA|1|S60|A|614
7QCA|1|S60|U|615
7QCA|1|S60|G|616
7QCA|1|S60|A|617
7QCA|1|S60|C|618
7QCA|1|S60|C|619

Current chains

Chain S60

RNA SSU

Nearby chains

Chain L50

Large subunit ribosomal RNA; LSU rRNA

Chain SB0

eS1 SB0

Chain SO0

40S ribosomal protein S14