IL_7QCA_138

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

AGAGUACGC*GAUAAAU

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|A|791
7QCA|1|S60|G|792
7QCA|1|S60|A|793
7QCA|1|S60|G|794
7QCA|1|S60|U|795
7QCA|1|S60|A|796
7QCA|1|S60|C|797
7QCA|1|S60|G|798
7QCA|1|S60|C|799
*
7QCA|1|S60|G|808
7QCA|1|S60|A|809
7QCA|1|S60|U|810
7QCA|1|S60|A|811
7QCA|1|S60|A|812
7QCA|1|S60|A|813
7QCA|1|S60|U|814

Current chains

Chain S60

RNA SSU

Nearby chains

Chain L50

Large subunit ribosomal RNA; LSU rRNA

Chain SX0

uS12 SX0