IL_7QCA_144

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CGUGUGAG*CGAUAG

Length

14 nucleotides

Bulged bases

7QCA|1|S60|U|908

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|C|904
7QCA|1|S60|G|905
7QCA|1|S60|U|906
7QCA|1|S60|G|907
7QCA|1|S60|U|908
7QCA|1|S60|G|909
7QCA|1|S60|A|910
7QCA|1|S60|G|911
*
7QCA|1|S60|C|921
7QCA|1|S60|G|922
7QCA|1|S60|A|923
7QCA|1|S60|U|924
7QCA|1|S60|A|925
7QCA|1|S60|G|926

Current chains

Chain S60

RNA SSU

Nearby chains

Chain SFF

Ubiquitin/40s ribosomal protein S27a fusion

Chain SK0

40S ribosomal protein S10

Chain SM0

40S ribosomal protein S12