IL_7QCA_152

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CAGG*CAGGAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|C|1022
7QCA|1|S60|A|1023
7QCA|1|S60|G|1024
7QCA|1|S60|G|1025
*
7QCA|1|S60|C|1037
7QCA|1|S60|A|1038
7QCA|1|S60|G|1039
7QCA|1|S60|G|1040
7QCA|1|S60|A|1041
7QCA|1|S60|A|1042
7QCA|1|S60|G|1043

Current chains

Chain S60

RNA SSU

Nearby chains

Chain SF0

40S ribosomal protein S5

Chain SGG

Guanine nucleotide binding protein beta subunit

Chain SQ0

40S ribosomal protein S16

Chain SR0

eS17 SR0