IL_7QCA_162

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CAGG*CAGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|C|1265
7QCA|1|S60|A|1266
7QCA|1|S60|G|1267
7QCA|1|S60|G|1268
*
7QCA|1|S60|C|1295
7QCA|1|S60|A|1296
7QCA|1|S60|G|1297
7QCA|1|S60|G|1298

Current chains

Chain S60

RNA SSU

Nearby chains

Chain L50

Large subunit ribosomal RNA; LSU rRNA

Chain LV0

Ribosomal protein L23

Chain SI0

40S ribosomal protein S8