IL_7QG8_075

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QG8_075 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2543

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7QG8|1|N|C|274
7QG8|1|N|C|275
7QG8|1|N|U|276
7QG8|1|N|G|277
7QG8|1|N|A|278
7QG8|1|N|A|279
7QG8|1|N|U|280
7QG8|1|N|C|281
*
7QG8|1|N|G|359
7QG8|1|N|U|360
7QG8|1|N|G|361
7QG8|1|N|A|362
7QG8|1|N|G|363

Current chains

Chain N

23S rRNA

Nearby chains