3D structure

PDB id
7QG8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the collided E. coli disome - VemP-stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.97 Å

Loop

Sequence
CGAAG*CUAAG
Length
10 nucleotides
Bulged bases
7QG8|1|N|A|1420
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QG8_117 not in the Motif Atlas
Homologous match to IL_5J7L_295
Geometric discrepancy: 0.1034
The information below is about IL_5J7L_295
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_38507.2
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
16

Unit IDs

7QG8|1|N|C|1417
7QG8|1|N|G|1418
7QG8|1|N|A|1419
7QG8|1|N|A|1420
7QG8|1|N|G|1421
*
7QG8|1|N|C|1577
7QG8|1|N|U|1578
7QG8|1|N|A|1579
7QG8|1|N|A|1580
7QG8|1|N|G|1581

Current chains

Chain N
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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