IL_7QG8_170

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

CUGAAG*CGUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QG8_170 not in the Motif Atlas

Geometric match to IL_5J7L_351

Geometric discrepancy: 0.1102

The information below is about IL_5J7L_351

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_29471.1

Basepair signature

cWW-cWW-L-tHS-L-cWW

Number of instances in this motif group

1

Unit IDs

7QG8|1|N|C|2806
7QG8|1|N|U|2807
7QG8|1|N|G|2808
7QG8|1|N|A|2809
7QG8|1|N|A|2810
7QG8|1|N|G|2811
*
7QG8|1|N|C|2889
7QG8|1|N|G|2890
7QG8|1|N|U|2891
7QG8|1|N|G|2892

Current chains

Chain N

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L3

Chain f

50S ribosomal protein L22

Chain n

50S ribosomal protein L32