3D structure

PDB id
7QG8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the collided E. coli disome - VemP-stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.97 Å

Loop

Sequence
GGAACUAGG*CUGUC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QG8_183 not in the Motif Atlas
Homologous match to IL_4WF9_117
Geometric discrepancy: 0.0686
The information below is about IL_4WF9_117
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_22854.4
Basepair signature
cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
Number of instances in this motif group
7

Unit IDs

7QG8|1|N|G|1666
7QG8|1|N|G|1667
7QG8|1|N|A|1668
7QG8|1|N|A|1669
7QG8|1|N|C|1670
7QG8|1|N|U|1671
7QG8|1|N|A|1672
7QG8|1|N|G|1673
7QG8|1|N|G|1674
*
7QG8|1|N|C|1990
7QG8|1|N|U|1991
7QG8|1|N|G|1992
7QG8|1|N|U|1993
7QG8|1|N|C|1994

Current chains

Chain N
23S rRNA

Nearby chains

Chain Q
50S ribosomal protein L3
Chain X
50S ribosomal protein L14

Coloring options:


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