IL_7QG8_187

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

GGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUAC

Length

35 nucleotides

Bulged bases

7QG8|1|N|U|2132, 7QG8|1|N|G|2133, 7QG8|1|N|A|2171, 7QG8|1|N|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QG8|1|N|G|2124
7QG8|1|N|G|2125
7QG8|1|N|A|2126
7QG8|1|N|G|2127
7QG8|1|N|G|2128
7QG8|1|N|C|2129
7QG8|1|N|U|2130
7QG8|1|N|U|2131
7QG8|1|N|U|2132
7QG8|1|N|G|2133
7QG8|1|N|A|2134
7QG8|1|N|A|2135
7QG8|1|N|G|2136
7QG8|1|N|U|2137
*
7QG8|1|N|A|2154
7QG8|1|N|U|2155
7QG8|1|N|G|2156
7QG8|1|N|G|2157
7QG8|1|N|A|2158
7QG8|1|N|G|2159
7QG8|1|N|C|2160
7QG8|1|N|C|2161
7QG8|1|N|G|2162
7QG8|1|N|A|2163
7QG8|1|N|C|2164
7QG8|1|N|C|2165
7QG8|1|N|U|2166
7QG8|1|N|U|2167
7QG8|1|N|G|2168
7QG8|1|N|A|2169
7QG8|1|N|A|2170
7QG8|1|N|A|2171
7QG8|1|N|U|2172
7QG8|1|N|A|2173
7QG8|1|N|C|2174

Current chains

Chain N

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L1