IL_7QGH_010

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

CUGCC*GAUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGH_010 not in the Motif Atlas

Homologous match to IL_5J7L_010

Geometric discrepancy: 0.1012

The information below is about IL_5J7L_010

Detailed Annotation

Minor groove platform related

Broad Annotation

Minor groove platform related

Motif group

IL_64231.5

Basepair signature

cWW-cWW-L-R-L-cWW

Number of instances in this motif group

11

Unit IDs

7QGH|1|0|C|132
7QGH|1|0|U|133
7QGH|1|0|G|134
7QGH|1|0|C|135
7QGH|1|0|C|136
*
7QGH|1|0|G|227
7QGH|1|0|A|228
7QGH|1|0|U|229
7QGH|1|0|G|230

Current chains

Chain 0

16S rRNA

Nearby chains

Chain G

30S ribosomal protein S16

Chain K

30S ribosomal protein S20