IL_7QGH_077

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

GAAC*GAGUGAAAAAGAAC

Length

18 nucleotides

Bulged bases

7QGH|1|N|A|504, 7QGH|1|N|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGH_077 not in the Motif Atlas

Geometric match to IL_5J7L_255

Geometric discrepancy: 0.0788

The information below is about IL_5J7L_255

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_81516.2

Basepair signature

cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L

Number of instances in this motif group

6

Unit IDs

7QGH|1|N|G|481
7QGH|1|N|A|482
7QGH|1|N|A|483
7QGH|1|N|C|484
*
7QGH|1|N|G|496
7QGH|1|N|A|497
7QGH|1|N|G|498
7QGH|1|N|U|499
7QGH|1|N|G|500
7QGH|1|N|A|501
7QGH|1|N|A|502
7QGH|1|N|A|503
7QGH|1|N|A|504
7QGH|1|N|A|505
7QGH|1|N|G|506
7QGH|1|N|A|507
7QGH|1|N|A|508
7QGH|1|N|C|509

Current chains

Chain N

23S rRNA

Nearby chains

Chain f

50S ribosomal protein L22

Chain h

50S ribosomal protein L24