IL_7QGH_095

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

GCAAG*CAACC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGH_095 not in the Motif Atlas

Homologous match to IL_5J7L_274

Geometric discrepancy: 0.1924

The information below is about IL_5J7L_274

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7QGH|1|N|G|875
7QGH|1|N|C|876
7QGH|1|N|A|877
7QGH|1|N|A|878
7QGH|1|N|G|879
*
7QGH|1|N|C|898
7QGH|1|N|A|899
7QGH|1|N|A|900
7QGH|1|N|C|901
7QGH|1|N|C|902

Current chains

Chain N

23S rRNA

Nearby chains

Chain Z

50S ribosomal protein L16

Chain u

Transfer RNA; tRNA