3D structure

PDB id
7QGH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli disome - collided 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.48 Å

Loop

Sequence
AUAAGUAA*UGAAAUU
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QGH_111 not in the Motif Atlas
Homologous match to IL_5J7L_289
Geometric discrepancy: 0.0604
The information below is about IL_5J7L_289
Detailed Annotation
8x7 Sarcin-Ricin; G-bulge
Broad Annotation
Sarcin-Ricin; G-bulge
Motif group
IL_04346.10
Basepair signature
cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
Number of instances in this motif group
15

Unit IDs

7QGH|1|N|A|1262
7QGH|1|N|U|1263
7QGH|1|N|A|1264
7QGH|1|N|A|1265
7QGH|1|N|G|1266
7QGH|1|N|U|1267
7QGH|1|N|A|1268
7QGH|1|N|A|1269
*
7QGH|1|N|U|2011
7QGH|1|N|G|2012
7QGH|1|N|A|2013
7QGH|1|N|A|2014
7QGH|1|N|A|2015
7QGH|1|N|U|2016
7QGH|1|N|U|2017

Current chains

Chain N
23S rRNA

Nearby chains

Chain R
50S ribosomal protein L4
Chain f
50S ribosomal protein L22
Chain n
50S ribosomal protein L32

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2107 s