IL_7QGR_075

3D structure

PDB id

7QGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGR_075 not in the Motif Atlas

Geometric match to IL_5J7L_253

Geometric discrepancy: 0.2543

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7QGR|1|N|C|274
7QGR|1|N|C|275
7QGR|1|N|U|276
7QGR|1|N|G|277
7QGR|1|N|A|278
7QGR|1|N|A|279
7QGR|1|N|U|280
7QGR|1|N|C|281
*
7QGR|1|N|G|359
7QGR|1|N|U|360
7QGR|1|N|G|361
7QGR|1|N|A|362
7QGR|1|N|G|363

Current chains

Chain N

23S rRNA

Nearby chains