IL_7QGR_148

3D structure

PDB id

7QGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGR_148 not in the Motif Atlas

Geometric match to IL_4NGF_002

Geometric discrepancy: 0.1521

The information below is about IL_4NGF_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

174

Unit IDs

7QGR|1|N|C|2103
7QGR|1|N|C|2104
7QGR|1|N|U|2105
*
7QGR|1|N|A|2184
7QGR|1|N|U|2185
7QGR|1|N|G|2186

Current chains

Chain N

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L1