IL_7QGR_187

3D structure

PDB id

7QGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUAC

Length

35 nucleotides

Bulged bases

7QGR|1|N|U|2132, 7QGR|1|N|G|2133, 7QGR|1|N|A|2171, 7QGR|1|N|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QGR|1|N|G|2124
7QGR|1|N|G|2125
7QGR|1|N|A|2126
7QGR|1|N|G|2127
7QGR|1|N|G|2128
7QGR|1|N|C|2129
7QGR|1|N|U|2130
7QGR|1|N|U|2131
7QGR|1|N|U|2132
7QGR|1|N|G|2133
7QGR|1|N|A|2134
7QGR|1|N|A|2135
7QGR|1|N|G|2136
7QGR|1|N|U|2137
*
7QGR|1|N|A|2154
7QGR|1|N|U|2155
7QGR|1|N|G|2156
7QGR|1|N|G|2157
7QGR|1|N|A|2158
7QGR|1|N|G|2159
7QGR|1|N|C|2160
7QGR|1|N|C|2161
7QGR|1|N|G|2162
7QGR|1|N|A|2163
7QGR|1|N|C|2164
7QGR|1|N|C|2165
7QGR|1|N|U|2166
7QGR|1|N|U|2167
7QGR|1|N|G|2168
7QGR|1|N|A|2169
7QGR|1|N|A|2170
7QGR|1|N|A|2171
7QGR|1|N|U|2172
7QGR|1|N|A|2173
7QGR|1|N|C|2174

Current chains

Chain N

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L1