IL_7QGU_004

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GGGAG*CUUUGAUC

Length

13 nucleotides

Bulged bases

7QGU|1|A|U|100

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_004 not in the Motif Atlas

Homologous match to IL_7RQB_004

Geometric discrepancy: 0.1769

The information below is about IL_7RQB_004

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_45067.2

Basepair signature

cWW-tSS-L-tSH-L-R-R-cWW-L

Number of instances in this motif group

18

Unit IDs

7QGU|1|A|G|81
7QGU|1|A|G|82
7QGU|1|A|G|83
7QGU|1|A|A|84
7QGU|1|A|G|85
*
7QGU|1|A|C|97
7QGU|1|A|U|98
7QGU|1|A|U|99
7QGU|1|A|U|100
7QGU|1|A|G|101
7QGU|1|A|A|102
7QGU|1|A|U|103
7QGU|1|A|C|104

Current chains

Chain A

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L24

Chain Z

50S ribosomal protein L29