IL_7QGU_012

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GAG*CC

Length

5 nucleotides

Bulged bases

7QGU|1|A|A|345

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_012 not in the Motif Atlas

Geometric match to IL_3MJA_001

Geometric discrepancy: 0.3768

The information below is about IL_3MJA_001

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

112

Unit IDs

7QGU|1|A|G|344
7QGU|1|A|A|345
7QGU|1|A|G|346
*
7QGU|1|A|C|359
7QGU|1|A|C|360

Current chains

Chain A

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L24