IL_7QGU_070

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

7QGU|1|A|G|1744

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_070 not in the Motif Atlas

Homologous match to IL_7RQB_068

Geometric discrepancy: 0.1338

The information below is about IL_7RQB_068

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_65969.2

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

7QGU|1|A|C|1731
7QGU|1|A|G|1732
7QGU|1|A|U|1733
7QGU|1|A|A|1734
7QGU|1|A|A|1735
7QGU|1|A|C|1736
*
7QGU|1|A|G|1741
7QGU|1|A|G|1742
7QGU|1|A|A|1743
7QGU|1|A|G|1744
7QGU|1|A|A|1745
7QGU|1|A|A|1746
7QGU|1|A|G|1747

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain W

Small subunit ribosomal RNA; SSU rRNA