IL_7QGU_077

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

UUAAG*UGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_077 not in the Motif Atlas

Homologous match to IL_4WF9_073

Geometric discrepancy: 0.2652

The information below is about IL_4WF9_073

Detailed Annotation

UAA/GAN with extra stack

Broad Annotation

No text annotation

Motif group

IL_89021.4

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

8

Unit IDs

7QGU|1|A|U|1880
7QGU|1|A|U|1881
7QGU|1|A|A|1882
7QGU|1|A|A|1883
7QGU|1|A|G|1884
*
7QGU|1|A|U|1916
7QGU|1|A|G|1917
7QGU|1|A|A|1918
7QGU|1|A|A|1919
7QGU|1|A|G|1920

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2