IL_7QGU_085

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases

7QGU|1|A|A|2468

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_085 not in the Motif Atlas

Homologous match to IL_4WF9_081

Geometric discrepancy: 0.1326

The information below is about IL_4WF9_081

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

68

Unit IDs

7QGU|1|A|G|2099
7QGU|1|A|A|2100
*
7QGU|1|A|U|2467
7QGU|1|A|A|2468
7QGU|1|A|C|2469
7QGU|1|A|C|2470

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

YqzJ

Chain C

50S ribosomal protein L2

Chain z

Transfer RNA; tRNA