IL_7QGU_104

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

UG*CAAG

Length

6 nucleotides

Bulged bases

7QGU|1|A|A|2571

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_104 not in the Motif Atlas

Homologous match to IL_7RQB_099

Geometric discrepancy: 0.2096

The information below is about IL_7RQB_099

Detailed Annotation

Major groove platform with intercalation

Broad Annotation

Major groove platform

Motif group

IL_95601.3

Basepair signature

cWW-tSH-cWW

Number of instances in this motif group

10

Unit IDs

7QGU|1|A|U|2551
7QGU|1|A|G|2552
*
7QGU|1|A|C|2569
7QGU|1|A|A|2570
7QGU|1|A|A|2571
7QGU|1|A|G|2572

Current chains

Chain A

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L13

Chain f

50S ribosomal protein L36