IL_7QGU_136

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

UGAUGAAG*CGUAAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_136 not in the Motif Atlas

Homologous match to IL_5J7L_020

Geometric discrepancy: 0.214

The information below is about IL_5J7L_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

7QGU|1|W|U|417
7QGU|1|W|G|418
7QGU|1|W|A|419
7QGU|1|W|U|420
7QGU|1|W|G|421
7QGU|1|W|A|422
7QGU|1|W|A|423
7QGU|1|W|G|424
*
7QGU|1|W|C|435
7QGU|1|W|G|436
7QGU|1|W|U|437
7QGU|1|W|A|438
7QGU|1|W|A|439
7QGU|1|W|A|440
7QGU|1|W|G|441

Current chains

Chain W

16S rRNA

Nearby chains

Chain i

30S ribosomal protein S4