IL_7QGU_141

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

CGCAG*UGAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_141 not in the Motif Atlas

Homologous match to IL_5J7L_027

Geometric discrepancy: 0.1057

The information below is about IL_5J7L_027

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

7QGU|1|W|C|589
7QGU|1|W|G|590
7QGU|1|W|C|591
7QGU|1|W|A|592
7QGU|1|W|G|593
*
7QGU|1|W|U|766
7QGU|1|W|G|767
7QGU|1|W|A|768
7QGU|1|W|G|769
7QGU|1|W|G|770

Current chains

Chain W

16S rRNA

Nearby chains

Chain m

30S ribosomal protein S8

Chain t

30S ribosomal protein S15

Chain v

30S ribosomal protein S17