IL_7QGU_171

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

CGGAUC*GUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_171 not in the Motif Atlas

Homologous match to IL_5J7L_057

Geometric discrepancy: 0.1153

The information below is about IL_5J7L_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

7QGU|1|W|C|1312
7QGU|1|W|G|1313
7QGU|1|W|G|1314
7QGU|1|W|A|1315
7QGU|1|W|U|1316
7QGU|1|W|C|1317
*
7QGU|1|W|G|1338
7QGU|1|W|U|1339
7QGU|1|W|G|1340
7QGU|1|W|A|1341
7QGU|1|W|A|1342
7QGU|1|W|G|1343

Current chains

Chain W

16S rRNA

Nearby chains

Chain r

30S ribosomal protein S13