IL_7QGU_180

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GUC*GCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_180 not in the Motif Atlas

Geometric match to IL_4E48_006

Geometric discrepancy: 0.1742

The information below is about IL_4E48_006

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_01003.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

215

Unit IDs

7QGU|1|W|G|1444
7QGU|1|W|U|1445
7QGU|1|W|C|1446
*
7QGU|1|W|G|1474
7QGU|1|W|C|1475
7QGU|1|W|C|1476

Current chains

Chain W

16S rRNA

Nearby chains

Chain P

50S ribosomal protein L19

Chain y

30S ribosomal protein S20