IL_7QGU_187

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GGAACUCGG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_187 not in the Motif Atlas

Homologous match to IL_4WF9_117

Geometric discrepancy: 0.254

The information below is about IL_4WF9_117

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80252.1

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

10

Unit IDs

7QGU|1|A|G|1711
7QGU|1|A|G|1712
7QGU|1|A|A|1713
7QGU|1|A|A|1714
7QGU|1|A|C|1715
7QGU|1|A|U|1716
7QGU|1|A|C|1717
7QGU|1|A|G|1718
7QGU|1|A|G|1719
*
7QGU|1|A|C|2019
7QGU|1|A|U|2020
7QGU|1|A|G|2021
7QGU|1|A|U|2022
7QGU|1|A|C|2023

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L14