IL_7QH7_032

3D structure

PDB id

7QH7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 4

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

UCUAG*CAACA

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QH7_032 not in the Motif Atlas

Homologous match to IL_8VTW_094

Geometric discrepancy: 0.4994

The information below is about IL_8VTW_094

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65585.1

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7QH7|1|A|U|2953
7QH7|1|A|C|2954
7QH7|1|A|U|2955
7QH7|1|A|A|2956
7QH7|1|A|G|2957
*
7QH7|1|A|C|2967
7QH7|1|A|A|2968
7QH7|1|A|A|2969
7QH7|1|A|C|2970
7QH7|1|A|A|2971

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain 4

39S ribosomal protein L36, mitochondrial

Chain N

39S ribosomal protein L16, mitochondrial