IL_7QH7_034

3D structure

PDB id

7QH7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 4

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

CA*UCG

Length

5 nucleotides

Bulged bases

7QH7|1|A|C|3060

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QH7_034 not in the Motif Atlas

Homologous match to IL_8VTW_097

Geometric discrepancy: 0.2414

The information below is about IL_8VTW_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24807.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

7QH7|1|A|C|2999
7QH7|1|A|A|3000
*
7QH7|1|A|U|3058
7QH7|1|A|C|3060
7QH7|1|A|G|3061

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain E

39S ribosomal protein L3, mitochondrial

Chain K

39S ribosomal protein L13, mitochondrial