IL_7QH7_036

3D structure

PDB id

7QH7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 4

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

7QH7|1|A|A|3089

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QH7_036 not in the Motif Atlas

Geometric match to IL_4V88_399

Geometric discrepancy: 0.3132

The information below is about IL_4V88_399

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

127

Unit IDs

7QH7|1|A|C|3078
7QH7|1|A|G|3079
*
7QH7|1|A|C|3088
7QH7|1|A|A|3089
7QH7|1|A|G|3090

Current chains

Chain A

16S ribosomal RNA

Nearby chains