3D structure

PDB id
7QH7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 4
Experimental method
ELECTRON MICROSCOPY
Resolution
2.89 Å

Loop

Sequence
GG*CGAAGAUCCAAUAACUUGACCAAC
Length
26 nucleotides
Bulged bases
7QH7|1|A|A|2914
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QH7|1|A|G|2846
7QH7|1|A|G|2855
*
7QH7|1|A|C|2877
7QH7|1|A|G|2878
7QH7|1|A|A|2879
7QH7|1|A|A|2880
7QH7|1|A|G|2896
7QH7|1|A|A|2897
7QH7|1|A|U|2898
7QH7|1|A|C|2899
7QH7|1|A|C|2900
7QH7|1|A|A|2901
7QH7|1|A|A|2902
7QH7|1|A|U|2903
7QH7|1|A|A|2904
7QH7|1|A|A|2905
7QH7|1|A|C|2906
7QH7|1|A|U|2907
7QH7|1|A|U|2908
7QH7|1|A|G|2909
7QH7|1|A|A|2910
7QH7|1|A|C|2911
7QH7|1|A|C|2912
7QH7|1|A|A|2913
7QH7|1|A|A|2914
7QH7|1|A|C|2915

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain 1
39S ribosomal protein L33, mitochondrial
Chain 3
39S ribosomal protein L35, mitochondrial
Chain M
39S ribosomal protein L15, mitochondrial
Chain X
39S ribosomal protein L28, mitochondrial
Chain q
Growth arrest and DNA damage-inducible proteins-interacting protein 1

Coloring options:

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