IL_7QI4_048

3D structure

PDB id

7QI4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome at 2.2 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

UGG*C(PSU)GA

Length

7 nucleotides

Bulged bases

7QI4|1|A|G|3068

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QI4_048 not in the Motif Atlas

Geometric match to IL_3C3Z_002

Geometric discrepancy: 0.3442

The information below is about IL_3C3Z_002

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_53541.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

7QI4|1|A|U|2994
7QI4|1|A|G|2995
7QI4|1|A|G|2996
*
7QI4|1|A|C|3066
7QI4|1|A|PSU|3067
7QI4|1|A|G|3068
7QI4|1|A|A|3069

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain Aw

A/A-tRNA

Chain E

39S ribosomal protein L3, mitochondrial