IL_7QI4_065
3D structure
- PDB id
- 7QI4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome at 2.2 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- GCAC*GC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QI4_065 not in the Motif Atlas
- Geometric match to IL_1NTA_003
- Geometric discrepancy: 0.1949
- The information below is about IL_1NTA_003
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_74641.2
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 33
Unit IDs
7QI4|1|AA|G|762
7QI4|1|AA|C|763
7QI4|1|AA|A|764
7QI4|1|AA|C|765
*
7QI4|1|AA|G|777
7QI4|1|AA|C|778
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A0
- 28S ribosomal protein S34, mitochondrial
- Chain A3
- Aurora kinase A-interacting protein
- Chain AL
- 28S ribosomal protein S15, mitochondrial
- Chain AN
- 28S ribosomal protein S17, mitochondrial
Coloring options: