IL_7QI4_078
3D structure
- PDB id
- 7QI4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome at 2.2 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- GACCC*GC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QI4_078 not in the Motif Atlas
- Geometric match to IL_5J7L_036
- Geometric discrepancy: 0.2899
- The information below is about IL_5J7L_036
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.2
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
7QI4|1|AA|G|1062
7QI4|1|AA|A|1063
7QI4|1|AA|C|1064
7QI4|1|AA|C|1065
7QI4|1|AA|C|1066
*
7QI4|1|AA|G|1092
7QI4|1|AA|C|1093
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain AI
- 28S ribosomal protein S11, mitochondrial
- Chain AQ
- MRPS21 isoform 1
- Chain D
- 39S ribosomal protein L2, mitochondrial
Coloring options: