IL_7QI4_093
3D structure
- PDB id
- 7QI4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome at 2.2 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- CC*GCUACAAAG
- Length
- 11 nucleotides
- Bulged bases
- 7QI4|1|AA|C|1293
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QI4_093 not in the Motif Atlas
- Geometric match to IL_8S95_001
- Geometric discrepancy: 0.245
- The information below is about IL_8S95_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25652.1
- Basepair signature
- cWW-tSS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7QI4|1|AA|C|1278
7QI4|1|AA|C|1279
*
7QI4|1|AA|G|1289
7QI4|1|AA|C|1290
7QI4|1|AA|U|1291
7QI4|1|AA|A|1292
7QI4|1|AA|C|1293
7QI4|1|AA|A|1294
7QI4|1|AA|A|1295
7QI4|1|AA|A|1296
7QI4|1|AA|G|1297
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A2
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
- Chain AB
- 28S ribosomal protein S2, mitochondrial
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AE
- 28S ribosomal protein S6, mitochondrial
- Chain AG
- 28S ribosomal protein S9, mitochondrial
- Chain AQ
- MRPS21 isoform 1
- Chain AS
- 28S ribosomal protein S23, mitochondrial
Coloring options: